---
slug: paper-pulselli-r-m-et-al-2009-self-organization-in-dissipative-structures-a-thermodyna
title: Pulselli et al. (2009): Thermodynamic Self-Organization and Prebiotic Cell Emergence
canonical: https://miscsubjects.com/a/paper-pulselli-r-m-et-al-2009-self-organization-in-dissipative-structures-a-thermodyna
---

## What the paper establishes

Pulselli, R.M., Simoncini, E., and Tiezzi, E. published this work in Biosystems volume 96 issue 3 pages 237-241 in June 2009. The paper outlines a thermodynamic framework for self-organization inside dissipative structures. It identifies conditions that raise complexity and produce order from energy flows in open non-equilibrium systems.

Core result: self-organization occurs when a system maintains an energy inflow, an entropy outflow, and a boundary such as a lipid bilayer. Under these conditions a spontaneous shift occurs from macrostates with many microstates to macrostates with fewer microstates. The authors tie this shift to the formation of prebiotic structures that later support epigenetic evolution.

The paper rests on Prigogine’s definition of dissipative structures. It adds the Molecular Anamorphic Evolution Theory to explain matter randomization processes.

## Exact passages from the primary work

The abstract states: “This paper presents a discussion on self-organization processes in dissipative structures, in order to highlight the general conditions for raising complexity and generate order.”

The abstract continues: “a spontaneous transition from macrostates richer in microstates to macrostates poorer in microstates was explained, as an attempt to point out the probable existing conditions at the formation of prebiotic structures.”

The abstract concludes: “It was then highlighted that the origin of life depends on epigenetic and autopoietic processes, since metabolism plays a more relevant role than replication in making novelties emerge.”

In the introduction the authors write: “As stated by Prigogine (1977), a Dissipative System or Structure is a thermodynamically open system that operates far from thermodynamic equilibrium and exchanges energy, matter, and information with the external environment.”

They note: “In these systems, organization can emerge through a spontaneous breaking of symmetry, both spatial and temporal, by virtue of the exchanges with the external environment that generates a formation of complex structures.”

All quotes above appear in the published text. No page numbers beyond the article range 237-241 are supplied in the source record.

## Convergence patterns touched

The work directly addresses energy flow producing structure. It describes bounded compartmental systems that maintain steady states through continuous dissipation. It links these states to increasing complexity and to the emergence of memory-like epigenetic processes.

These elements map to the grain patterns of flow networks and bounded chaos in non-equilibrium conditions. The prebiotic cell model supplies an early instance of structure arising from flow that later supports memory and life-like behavior. The paper stops short of mind or reader-in-system reflection.

See related discussion in /a/oip-the-ladder and /a/oip-principles.

## Distance from the full OIP/GRAIN synthesis

The synthesis posits a Ladder that runs difference to flow to structure to memory to life to mind, with the reader inside the system at the Mirror Layer. This paper supplies a thermodynamic account of the flow-to-structure step and an early memory step via epigenetics. It does not address later Ladder stages or the Mirror Layer.

The authors remain within physical chemistry and prebiotic theory. Their claims stay mechanistic within thermodynamics and move into speculative territory when they extend the framework to epigenetic evolution.

## Honest limits and disconfirming edges

The paper is a theoretical discussion. It presents no new experimental data. Claims about prebiotic cell formation rest on prior observations of lipid bilayers and aqueous solutions. The epigenetic emphasis is interpretive rather than demonstrated.

A reductionist account in the style of Weinberg would note that the described transitions remain compatible with standard statistical mechanics and do not require new physical laws. The work cites Prigogine heavily; independent replication of specific prebiotic transitions remains limited.

No direct evidence is supplied for scale invariance across biological levels or for wave or spiral patterns inside the proposed cells.

## Atomic claims

Each claim below stands alone.

- Claim c1: Dissipative structures maintain organization through continuous energy inflow and entropy outflow. Tier: mechanistic. Source: the 2009 paper abstract and introduction.
- Claim c2: A spontaneous transition from macrostates richer in microstates to macrostates poorer in microstates occurs under the stated boundary and flow conditions. Tier: mechanistic. Source: the 2009 paper abstract.
- Claim c3: Metabolism and epigenetic processes play a larger role than replication in the emergence of novelty during prebiotic evolution. Tier: speculative. Source: the 2009 paper abstract.
- Claim c4: The framework applies to closed systems bounded by lipid bilayers containing internal water. Tier: anecdotal. Source: the 2009 paper section on water in compartmentalized environments, citing prior work.
- Claim c5: The described self-organization constitutes an early instance of energy flow generating persistent structure. Tier: mechanistic. Source: synthesis mapping to the paper’s thermodynamic conditions.

## Sources used

Primary source: Pulselli RM, Simoncini E, Tiezzi E. Self-organization in dissipative structures: a thermodynamic theory for the emergence of prebiotic cells and their epigenetic evolution. Biosystems. 2009 Jun;96(3):237-41. doi:10.1016/j.biosystems.2009.02.004. Epub 2009 Mar 24. PMID: 19758548.

Supporting reference inside the paper: Prigogine I. 1977 statements on dissipative structures as open non-equilibrium systems.

All other citations in the 2009 paper (Wicken, Ashby, etc.) are noted but not re-quoted here because full passages remain behind paywalls.

The article ends here. No further expansion is supplied because the source material is exhausted.
